FA-65811 / Ecological population dynamics / Open access
Rosenzweig-MacArthur equilibrium and enrichment stability: Hopf boundary · case 01
The exact Hopf bifurcation point is labelled stable.
ROOT CAUSE
The stability test includes equality.
VERIFIED REPAIR
Restore the Hopf boundary rule: `if ns > hump:`.
Unsuccessful approach: Rounding before comparing misclassifies points just above the hump.
Case contract
Type II predator-prey: N* = m/(a(e-hm)) requires e>hm and N*<K else ['predator-extinct', [K, 0]]; P* = (r/a)(1-N*/K)(1+ahN*); hump = (K-1/(ah))/2 for h>0 else -1; stable if N*>hump, 'hopf' if equal, else 'cycles'; values rounded 6; None for invalid parameters.
Why this case matters
Population projections set harvest quotas, conservation status and pest-control timing; a wrong update order, boundary or rate conversion silently changes management advice.
1 / The failure
Exit 1"""Failure Map reference implementation. Python standard library only."""
import json
import math
N = 1
observations = []
def solve(r, k, a, h, e, m):
if min(r, k, a, e, m) <= 0 or h < 0:
return None
if e <= h * m:
return ['predator-extinct', [float(k), 0.0]]
ns = m / (a * (e - h * m))
if ns >= k:
return ['predator-extinct', [float(k), 0.0]]
ps = r / a * (1 - ns / k) * (1 + a * h * ns)
hump = (k - 1 / (a * h)) / 2 if h > 0 else -1.0
if ns >= hump:
kind = 'stable'
elif ns == hump:
kind = 'hopf'
else:
kind = 'cycles'
return [kind, [round(ns, 6), round(ps, 6)]]
def check(label, actual, expected):
observations.append({"check": label, "actual": actual, "expected": expected, "passed": actual == expected})
fixtures = [[('regression: exact hopf point', (1.0, 10.0, 1.0, 0.5, 1.5, 2.0), ['hopf', [4.0, 1.8]]),
('control: enriched cycles', (1.0, 40.0, 1.0, 0.5, 1.5, 2.0), ['cycles', [4.0, 2.7]]),
('control: poor habitat stable', (1.0, 8.0, 1.0, 0.5, 1.5, 2.0), ['stable', [4.0, 1.5]]),
('control: just above hump', (1.0, 10.06, 1.0, 0.5, 1.5, 2.0), ['cycles', [4.0, 1.807157]]),
('regression: just below enrichment threshold',
(1.0, 9.94, 1.0, 0.5, 1.5, 2.0),
['stable', [4.0, 1.792757]]),
('control: inefficient predator', (1.0, 50.0, 1.0, 0.5, 1.0, 2.0), ['predator-extinct', [50.0, 0.0]]),
('control: predator cannot persist capacity',
(1.0, 3.0, 1.0, 0.5, 1.5, 2.0),
['predator-extinct', [3.0, 0.0]])],
[('regression: exact hopf point', (1.0, 10.0, 1.0, 0.5, 1.5, 2.0), ['hopf', [4.0, 1.8]]),
('control: just above hump', (1.0, 10.06, 1.0, 0.5, 1.5, 2.0), ['cycles', [4.0, 1.807157]]),
('regression: just below enrichment threshold',
(1.0, 9.94, 1.0, 0.5, 1.5, 2.0),
['stable', [4.0, 1.792757]]),
('control: inefficient predator', (1.0, 50.0, 1.0, 0.5, 1.0, 2.0), ['predator-extinct', [50.0, 0.0]]),
('control: predator cannot persist capacity',
(1.0, 3.0, 1.0, 0.5, 1.5, 2.0),
['predator-extinct', [3.0, 0.0]]),
('control: type I predator', (0.8, 30.0, 0.2, 0.0, 0.5, 0.4), ['stable', [4.0, 3.466667]]),
('control: invalid rate', (0.0, 10.0, 1.0, 0.5, 1.5, 2.0), None)],
[('regression: exact hopf point', (1.0, 10.0, 1.0, 0.5, 1.5, 2.0), ['hopf', [4.0, 1.8]]),
('regression: just below enrichment threshold',
(1.0, 9.94, 1.0, 0.5, 1.5, 2.0),
['stable', [4.0, 1.792757]]),
('control: predator cannot persist capacity',
(1.0, 3.0, 1.0, 0.5, 1.5, 2.0),
['predator-extinct', [3.0, 0.0]]),
('control: type I predator', (0.8, 30.0, 0.2, 0.0, 0.5, 0.4), ['stable', [4.0, 3.466667]]),
('control: invalid rate', (0.0, 10.0, 1.0, 0.5, 1.5, 2.0), None),
('control: lynx hare like', (1.2, 60.0, 0.05, 0.2, 0.6, 0.3), ['stable', [11.111111, 21.728395]]),
('control: borderline conversion', (1.0, 20.0, 0.5, 0.5, 0.9, 1.6), ['predator-extinct', [20.0, 0.0]])],
[('regression: exact hopf point', (1.0, 10.0, 1.0, 0.5, 1.5, 2.0), ['hopf', [4.0, 1.8]]),
('control: enriched cycles', (1.0, 40.0, 1.0, 0.5, 1.5, 2.0), ['cycles', [4.0, 2.7]]),
('control: poor habitat stable', (1.0, 8.0, 1.0, 0.5, 1.5, 2.0), ['stable', [4.0, 1.5]]),
('control: just above hump', (1.0, 10.06, 1.0, 0.5, 1.5, 2.0), ['cycles', [4.0, 1.807157]]),
('regression: just below enrichment threshold',
(1.0, 9.94, 1.0, 0.5, 1.5, 2.0),
['stable', [4.0, 1.792757]]),
('control: lynx hare like', (1.2, 60.0, 0.05, 0.2, 0.6, 0.3), ['stable', [11.111111, 21.728395]]),
('control: borderline conversion', (1.0, 20.0, 0.5, 0.5, 0.9, 1.6), ['predator-extinct', [20.0, 0.0]])],
[('regression: exact hopf point', (1.0, 10.0, 1.0, 0.5, 1.5, 2.0), ['hopf', [4.0, 1.8]]),
('control: enriched cycles', (1.0, 40.0, 1.0, 0.5, 1.5, 2.0), ['cycles', [4.0, 2.7]]),
('control: poor habitat stable', (1.0, 8.0, 1.0, 0.5, 1.5, 2.0), ['stable', [4.0, 1.5]]),
('control: just above hump', (1.0, 10.06, 1.0, 0.5, 1.5, 2.0), ['cycles', [4.0, 1.807157]]),
('regression: just below enrichment threshold',
(1.0, 9.94, 1.0, 0.5, 1.5, 2.0),
['stable', [4.0, 1.792757]]),
('control: inefficient predator', (1.0, 50.0, 1.0, 0.5, 1.0, 2.0), ['predator-extinct', [50.0, 0.0]]),
('control: predator cannot persist capacity',
(1.0, 3.0, 1.0, 0.5, 1.5, 2.0),
['predator-extinct', [3.0, 0.0]])]]
for label, args, expected in fixtures[N - 1]:
check(label, solve(*args), expected)
print(json.dumps({"observations": observations, "passed": all(x["passed"] for x in observations)}, ensure_ascii=False))
raise SystemExit(0 if all(x["passed"] for x in observations) else 1)
| Boundary fixture | Actual | Expected | Outcome |
|---|---|---|---|
| regression: exact hopf point | ['stable', [4.0, 1.8]] | ['hopf', [4.0, 1.8]] | Failed |
| control: enriched cycles | ['cycles', [4.0, 2.7]] | ['cycles', [4.0, 2.7]] | Passed |
| control: poor habitat stable | ['stable', [4.0, 1.5]] | ['stable', [4.0, 1.5]] | Passed |
| control: just above hump | ['cycles', [4.0, 1.807157]] | ['cycles', [4.0, 1.807157]] | Passed |
| regression: just below enrichment threshold | ['stable', [4.0, 1.792757]] | ['stable', [4.0, 1.792757]] | Passed |
| control: inefficient predator | ['predator-extinct', [50.0, 0.0]] | ['predator-extinct', [50.0, 0.0]] | Passed |
| control: predator cannot persist capacity | ['predator-extinct', [3.0, 0.0]] | ['predator-extinct', [3.0, 0.0]] | Passed |
SHA-256 / 6c2d22e5a98753b6a9bddc2dcc847d9269946b058e2f03a5caa9bf163706f986
2 / The unsuccessful fix
Exit 1"""Failure Map reference implementation. Python standard library only."""
import json
import math
N = 1
observations = []
def solve(r, k, a, h, e, m):
if min(r, k, a, e, m) <= 0 or h < 0:
return None
if e <= h * m:
return ['predator-extinct', [float(k), 0.0]]
ns = m / (a * (e - h * m))
if ns >= k:
return ['predator-extinct', [float(k), 0.0]]
ps = r / a * (1 - ns / k) * (1 + a * h * ns)
hump = (k - 1 / (a * h)) / 2 if h > 0 else -1.0
if round(ns, 1) > round(hump, 1):
kind = 'stable'
elif ns == hump:
kind = 'hopf'
else:
kind = 'cycles'
return [kind, [round(ns, 6), round(ps, 6)]]
def check(label, actual, expected):
observations.append({"check": label, "actual": actual, "expected": expected, "passed": actual == expected})
fixtures = [[('regression: exact hopf point', (1.0, 10.0, 1.0, 0.5, 1.5, 2.0), ['hopf', [4.0, 1.8]]),
('control: enriched cycles', (1.0, 40.0, 1.0, 0.5, 1.5, 2.0), ['cycles', [4.0, 2.7]]),
('control: poor habitat stable', (1.0, 8.0, 1.0, 0.5, 1.5, 2.0), ['stable', [4.0, 1.5]]),
('control: just above hump', (1.0, 10.06, 1.0, 0.5, 1.5, 2.0), ['cycles', [4.0, 1.807157]]),
('regression: just below enrichment threshold',
(1.0, 9.94, 1.0, 0.5, 1.5, 2.0),
['stable', [4.0, 1.792757]]),
('control: inefficient predator', (1.0, 50.0, 1.0, 0.5, 1.0, 2.0), ['predator-extinct', [50.0, 0.0]]),
('control: predator cannot persist capacity',
(1.0, 3.0, 1.0, 0.5, 1.5, 2.0),
['predator-extinct', [3.0, 0.0]])],
[('regression: exact hopf point', (1.0, 10.0, 1.0, 0.5, 1.5, 2.0), ['hopf', [4.0, 1.8]]),
('control: just above hump', (1.0, 10.06, 1.0, 0.5, 1.5, 2.0), ['cycles', [4.0, 1.807157]]),
('regression: just below enrichment threshold',
(1.0, 9.94, 1.0, 0.5, 1.5, 2.0),
['stable', [4.0, 1.792757]]),
('control: inefficient predator', (1.0, 50.0, 1.0, 0.5, 1.0, 2.0), ['predator-extinct', [50.0, 0.0]]),
('control: predator cannot persist capacity',
(1.0, 3.0, 1.0, 0.5, 1.5, 2.0),
['predator-extinct', [3.0, 0.0]]),
('control: type I predator', (0.8, 30.0, 0.2, 0.0, 0.5, 0.4), ['stable', [4.0, 3.466667]]),
('control: invalid rate', (0.0, 10.0, 1.0, 0.5, 1.5, 2.0), None)],
[('regression: exact hopf point', (1.0, 10.0, 1.0, 0.5, 1.5, 2.0), ['hopf', [4.0, 1.8]]),
('regression: just below enrichment threshold',
(1.0, 9.94, 1.0, 0.5, 1.5, 2.0),
['stable', [4.0, 1.792757]]),
('control: predator cannot persist capacity',
(1.0, 3.0, 1.0, 0.5, 1.5, 2.0),
['predator-extinct', [3.0, 0.0]]),
('control: type I predator', (0.8, 30.0, 0.2, 0.0, 0.5, 0.4), ['stable', [4.0, 3.466667]]),
('control: invalid rate', (0.0, 10.0, 1.0, 0.5, 1.5, 2.0), None),
('control: lynx hare like', (1.2, 60.0, 0.05, 0.2, 0.6, 0.3), ['stable', [11.111111, 21.728395]]),
('control: borderline conversion', (1.0, 20.0, 0.5, 0.5, 0.9, 1.6), ['predator-extinct', [20.0, 0.0]])],
[('regression: exact hopf point', (1.0, 10.0, 1.0, 0.5, 1.5, 2.0), ['hopf', [4.0, 1.8]]),
('control: enriched cycles', (1.0, 40.0, 1.0, 0.5, 1.5, 2.0), ['cycles', [4.0, 2.7]]),
('control: poor habitat stable', (1.0, 8.0, 1.0, 0.5, 1.5, 2.0), ['stable', [4.0, 1.5]]),
('control: just above hump', (1.0, 10.06, 1.0, 0.5, 1.5, 2.0), ['cycles', [4.0, 1.807157]]),
('regression: just below enrichment threshold',
(1.0, 9.94, 1.0, 0.5, 1.5, 2.0),
['stable', [4.0, 1.792757]]),
('control: lynx hare like', (1.2, 60.0, 0.05, 0.2, 0.6, 0.3), ['stable', [11.111111, 21.728395]]),
('control: borderline conversion', (1.0, 20.0, 0.5, 0.5, 0.9, 1.6), ['predator-extinct', [20.0, 0.0]])],
[('regression: exact hopf point', (1.0, 10.0, 1.0, 0.5, 1.5, 2.0), ['hopf', [4.0, 1.8]]),
('control: enriched cycles', (1.0, 40.0, 1.0, 0.5, 1.5, 2.0), ['cycles', [4.0, 2.7]]),
('control: poor habitat stable', (1.0, 8.0, 1.0, 0.5, 1.5, 2.0), ['stable', [4.0, 1.5]]),
('control: just above hump', (1.0, 10.06, 1.0, 0.5, 1.5, 2.0), ['cycles', [4.0, 1.807157]]),
('regression: just below enrichment threshold',
(1.0, 9.94, 1.0, 0.5, 1.5, 2.0),
['stable', [4.0, 1.792757]]),
('control: inefficient predator', (1.0, 50.0, 1.0, 0.5, 1.0, 2.0), ['predator-extinct', [50.0, 0.0]]),
('control: predator cannot persist capacity',
(1.0, 3.0, 1.0, 0.5, 1.5, 2.0),
['predator-extinct', [3.0, 0.0]])]]
for label, args, expected in fixtures[N - 1]:
check(label, solve(*args), expected)
print(json.dumps({"observations": observations, "passed": all(x["passed"] for x in observations)}, ensure_ascii=False))
raise SystemExit(0 if all(x["passed"] for x in observations) else 1)
| Boundary fixture | Actual | Expected | Outcome |
|---|---|---|---|
| regression: exact hopf point | ['hopf', [4.0, 1.8]] | ['hopf', [4.0, 1.8]] | Passed |
| control: enriched cycles | ['cycles', [4.0, 2.7]] | ['cycles', [4.0, 2.7]] | Passed |
| control: poor habitat stable | ['stable', [4.0, 1.5]] | ['stable', [4.0, 1.5]] | Passed |
| control: just above hump | ['cycles', [4.0, 1.807157]] | ['cycles', [4.0, 1.807157]] | Passed |
| regression: just below enrichment threshold | ['cycles', [4.0, 1.792757]] | ['stable', [4.0, 1.792757]] | Failed |
| control: inefficient predator | ['predator-extinct', [50.0, 0.0]] | ['predator-extinct', [50.0, 0.0]] | Passed |
| control: predator cannot persist capacity | ['predator-extinct', [3.0, 0.0]] | ['predator-extinct', [3.0, 0.0]] | Passed |
SHA-256 / 849681278e8790f32cb111e66b1bdaeb3dd853b43953dffcdbd56cc7d4f36f68
3 / The verified repair
Exit 0"""Failure Map reference implementation. Python standard library only."""
import json
import math
N = 1
observations = []
def solve(r, k, a, h, e, m):
if min(r, k, a, e, m) <= 0 or h < 0:
return None
if e <= h * m:
return ['predator-extinct', [float(k), 0.0]]
ns = m / (a * (e - h * m))
if ns >= k:
return ['predator-extinct', [float(k), 0.0]]
ps = r / a * (1 - ns / k) * (1 + a * h * ns)
hump = (k - 1 / (a * h)) / 2 if h > 0 else -1.0
if ns > hump:
kind = 'stable'
elif ns == hump:
kind = 'hopf'
else:
kind = 'cycles'
return [kind, [round(ns, 6), round(ps, 6)]]
def check(label, actual, expected):
observations.append({"check": label, "actual": actual, "expected": expected, "passed": actual == expected})
fixtures = [[('regression: exact hopf point', (1.0, 10.0, 1.0, 0.5, 1.5, 2.0), ['hopf', [4.0, 1.8]]),
('control: enriched cycles', (1.0, 40.0, 1.0, 0.5, 1.5, 2.0), ['cycles', [4.0, 2.7]]),
('control: poor habitat stable', (1.0, 8.0, 1.0, 0.5, 1.5, 2.0), ['stable', [4.0, 1.5]]),
('control: just above hump', (1.0, 10.06, 1.0, 0.5, 1.5, 2.0), ['cycles', [4.0, 1.807157]]),
('regression: just below enrichment threshold',
(1.0, 9.94, 1.0, 0.5, 1.5, 2.0),
['stable', [4.0, 1.792757]]),
('control: inefficient predator', (1.0, 50.0, 1.0, 0.5, 1.0, 2.0), ['predator-extinct', [50.0, 0.0]]),
('control: predator cannot persist capacity',
(1.0, 3.0, 1.0, 0.5, 1.5, 2.0),
['predator-extinct', [3.0, 0.0]])],
[('regression: exact hopf point', (1.0, 10.0, 1.0, 0.5, 1.5, 2.0), ['hopf', [4.0, 1.8]]),
('control: just above hump', (1.0, 10.06, 1.0, 0.5, 1.5, 2.0), ['cycles', [4.0, 1.807157]]),
('regression: just below enrichment threshold',
(1.0, 9.94, 1.0, 0.5, 1.5, 2.0),
['stable', [4.0, 1.792757]]),
('control: inefficient predator', (1.0, 50.0, 1.0, 0.5, 1.0, 2.0), ['predator-extinct', [50.0, 0.0]]),
('control: predator cannot persist capacity',
(1.0, 3.0, 1.0, 0.5, 1.5, 2.0),
['predator-extinct', [3.0, 0.0]]),
('control: type I predator', (0.8, 30.0, 0.2, 0.0, 0.5, 0.4), ['stable', [4.0, 3.466667]]),
('control: invalid rate', (0.0, 10.0, 1.0, 0.5, 1.5, 2.0), None)],
[('regression: exact hopf point', (1.0, 10.0, 1.0, 0.5, 1.5, 2.0), ['hopf', [4.0, 1.8]]),
('regression: just below enrichment threshold',
(1.0, 9.94, 1.0, 0.5, 1.5, 2.0),
['stable', [4.0, 1.792757]]),
('control: predator cannot persist capacity',
(1.0, 3.0, 1.0, 0.5, 1.5, 2.0),
['predator-extinct', [3.0, 0.0]]),
('control: type I predator', (0.8, 30.0, 0.2, 0.0, 0.5, 0.4), ['stable', [4.0, 3.466667]]),
('control: invalid rate', (0.0, 10.0, 1.0, 0.5, 1.5, 2.0), None),
('control: lynx hare like', (1.2, 60.0, 0.05, 0.2, 0.6, 0.3), ['stable', [11.111111, 21.728395]]),
('control: borderline conversion', (1.0, 20.0, 0.5, 0.5, 0.9, 1.6), ['predator-extinct', [20.0, 0.0]])],
[('regression: exact hopf point', (1.0, 10.0, 1.0, 0.5, 1.5, 2.0), ['hopf', [4.0, 1.8]]),
('control: enriched cycles', (1.0, 40.0, 1.0, 0.5, 1.5, 2.0), ['cycles', [4.0, 2.7]]),
('control: poor habitat stable', (1.0, 8.0, 1.0, 0.5, 1.5, 2.0), ['stable', [4.0, 1.5]]),
('control: just above hump', (1.0, 10.06, 1.0, 0.5, 1.5, 2.0), ['cycles', [4.0, 1.807157]]),
('regression: just below enrichment threshold',
(1.0, 9.94, 1.0, 0.5, 1.5, 2.0),
['stable', [4.0, 1.792757]]),
('control: lynx hare like', (1.2, 60.0, 0.05, 0.2, 0.6, 0.3), ['stable', [11.111111, 21.728395]]),
('control: borderline conversion', (1.0, 20.0, 0.5, 0.5, 0.9, 1.6), ['predator-extinct', [20.0, 0.0]])],
[('regression: exact hopf point', (1.0, 10.0, 1.0, 0.5, 1.5, 2.0), ['hopf', [4.0, 1.8]]),
('control: enriched cycles', (1.0, 40.0, 1.0, 0.5, 1.5, 2.0), ['cycles', [4.0, 2.7]]),
('control: poor habitat stable', (1.0, 8.0, 1.0, 0.5, 1.5, 2.0), ['stable', [4.0, 1.5]]),
('control: just above hump', (1.0, 10.06, 1.0, 0.5, 1.5, 2.0), ['cycles', [4.0, 1.807157]]),
('regression: just below enrichment threshold',
(1.0, 9.94, 1.0, 0.5, 1.5, 2.0),
['stable', [4.0, 1.792757]]),
('control: inefficient predator', (1.0, 50.0, 1.0, 0.5, 1.0, 2.0), ['predator-extinct', [50.0, 0.0]]),
('control: predator cannot persist capacity',
(1.0, 3.0, 1.0, 0.5, 1.5, 2.0),
['predator-extinct', [3.0, 0.0]])]]
for label, args, expected in fixtures[N - 1]:
check(label, solve(*args), expected)
print(json.dumps({"observations": observations, "passed": all(x["passed"] for x in observations)}, ensure_ascii=False))
raise SystemExit(0 if all(x["passed"] for x in observations) else 1)
| Boundary fixture | Actual | Expected | Outcome |
|---|---|---|---|
| regression: exact hopf point | ['hopf', [4.0, 1.8]] | ['hopf', [4.0, 1.8]] | Passed |
| control: enriched cycles | ['cycles', [4.0, 2.7]] | ['cycles', [4.0, 2.7]] | Passed |
| control: poor habitat stable | ['stable', [4.0, 1.5]] | ['stable', [4.0, 1.5]] | Passed |
| control: just above hump | ['cycles', [4.0, 1.807157]] | ['cycles', [4.0, 1.807157]] | Passed |
| regression: just below enrichment threshold | ['stable', [4.0, 1.792757]] | ['stable', [4.0, 1.792757]] | Passed |
| control: inefficient predator | ['predator-extinct', [50.0, 0.0]] | ['predator-extinct', [50.0, 0.0]] | Passed |
| control: predator cannot persist capacity | ['predator-extinct', [3.0, 0.0]] | ['predator-extinct', [3.0, 0.0]] | Passed |
SHA-256 / 71833b0857171a2a980ec276f46b65eb13d54d3d404f881c56cce5774f44b83c
Verification & scope
Deterministic bounded teaching model with a stipulated contract; not a validated scientific or public-health modelling library. This reproducer isolates one failure mechanism. Results cover the supplied fixtures. Variants within a family share a test contract and should remain grouped when constructing evaluation splits. Related mechanisms with a shared evaluation_group must also remain together; these controlled models are not independent production incidents.
Observations recorded using Python 3.12.14 at 2026-09-29T14:47:37.302126+00:00.
Case digest / dee1e4bfeabbcc1ec3629d6b5d4e1e551ef46080e35ddada9e6a828f49ab0ef2