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Contig aliases choose an arbitrary reference target · case 02

Contig aliases choose an arbitrary reference target.

Member previewVariant 2 · 3 implementations · 6 checks per implementation

Case contract

Names identify canonical contigs; aliases may collide. Exact canonical match wins; ambiguous or absent aliases return None.

Why this case matters

An abstract offline coordinate model isolates this software mapping defect; it does not model biological interpretation.

One recorded failure

Sample boundary fixture

This sample comes from the broken implementation of a controlled reproducer.

Boundary fixtureActualExpectedOutcome
ambiguous alias"contig2"nullFailed

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This record includes three runnable implementations, regression fixtures, execution results, and source hashes.

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